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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806671.1_cds_XP_016494474.1_8883
CDS Infomation

[gene=LOC107813698] [db_xref=GeneID:107813698] [protein=protein DETOXIFICATION 46, chloroplastic-like isoform X1] [protein_id=XP_016494474.1] [location=join(131174..131609,137684..137778,138254..138362,138463..138518,138906..138961,139717..139855,139989..140126,140207..140275,140366..140476,140680..140808,141328..141405,141629..141700,142223..142285,142384..142485)] [gbkey=CDS]
Sequence

ATGTCAATGTACACTCAAGCAATCAATCTTAACACTTTCACTCATCAATCTCGAATCCCA
ATACAAATTCCAACTCTCAATGTTTGCTCCTTTTCAACTCGATTCCGAACTTCTCGGACT
ACACAAACAACTCAAATCTGCAATCCTCGCAAGCTAATAATCACTTGTTGTTCAACTCCT
AGCCAAGAATTTACTGATGTAGAAACCTCAGATTCAGTTTCAGCTATCAAAGTAGGAAAT
GAACAAGTTGAAAAAATTCAAGTGTTAGAGTCTAGCGGACGAGAATTTTCTGCAAATGAA
AGTATTTGGACTCAAATGGTGGAAATTGCAAAGTTTTCAGGGCCAGCAGTTGGGCTCTGG
TTATGTGGGCCATTAATGAGTCTTATTGATACTGCTGTTGTTGGTCAAGGAAGTTCCATT
GAACTCGCTGCTCTAGGTCCTGGAACCGTTTTCTGTGACAACATAAGCTACATCTTTATG
TTCCTTACAATTGCCACTTCAAACTTAGTTGCTACTTCACTTGCACAGCAGGACAAAGAT
AAAGTGCAGCATCAGATATCTATCTTGCTTTTTATTGGGCTTGTCTGTGGTGTTGTGATG
TTTATTTTTACGAGATTGTTTGGTATCAAGGCAATCACTTCCTTCACTGGGGAAAATAAT
GTAGATATCATAAACTCAGCAAACACTTATGTCCAGATTCGAGGCTTGGCATGGCCAGCA
CTGCTGGTTGGTTGGGTTGCCCAAAGTGCAAGTTTAGGCATGAAAGATTCATGGGGACCT
TTAAAGGCTTTGGCCATTGCTACTGTTATTAATGGTACTGGTGACATAGTCTTGTGTCGA
TTCTTCAGTTATGGTATTGCTGGAGCAGCATGGGCAACAACGGTATCTCAAGTCGTTGCA
GCTTATATGATGATCCAAGCACTGAACGATAAAGGATATAAGGGCTGTGCTATCTCTATT
CCATCACCAGATGAACTTCTGCAGATATTCATGATTGCCGGCCCTGTGTTTCTAACAATG
ATGTCAAAGGTTGCATTCTACTCTCTACTTGTCTATTTTGCTACCTCAATGGGCACACAG
ACAATTGCTGCGCATCAGGTCATGGTACAATTGTTCATGATATGTGCAGTATGGGGTGAG
CCTCTCTCTCAAACAGCACAGTCGTTTATGCCCGAATTGTTATATGGAGTCAACCGAAAT
TTGTCAAAGGCTAGGATGCTGCTGAAGTCCCTAGTGGTTGTTGGAACATCGTTCGGACTG
ATACTGGCATCTGTTGCAGCATCAGTTCCATGGTTATTCCCCAAAATCTTTTCGCCTGAT
CCTGAGGTCATACGTGAGATGCATAAAATAGTGTTGCCATACTTTCTAGCCCTATGTGTG
ACACCAAGCATTCTTAGTCTTGAGGGAACTCTGTTGGCTGGACGAGACTTGAAATTCATA
AGCTTATCAATGAGCTCGATATTTGTTTTGGCTTCTCTTCTCCTAATGCTGCTGAGCAGC
AAAGGACTTGGTTTATCTGGATGCTGGTTTGCGCTTGTTGTATTCCAATGGTCTCGATTT
TTTATTGCTCTACGACGCCTTACCTTGTCGGATGGCATACTCTATTCAGAAGAATCAACT
CAGTATGAGCTACAGAAGTTGAAAGCTGTATAG

Peptide Sequence

PEP ID

XP_016494474.1
PEP Infomation

PREDICTED: protein DETOXIFICATION 46, chloroplastic-like isoform X1 [Nicotiana tabacum]
Sequence

MSMYTQAINLNTFTHQSRIPIQIPTLNVCSFSTRFRTSRTTQTTQICNPRKLIITCCSTP
SQEFTDVETSDSVSAIKVGNEQVEKIQVLESSGREFSANESIWTQMVEIAKFSGPAVGLW
LCGPLMSLIDTAVVGQGSSIELAALGPGTVFCDNISYIFMFLTIATSNLVATSLAQQDKD
KVQHQISILLFIGLVCGVVMFIFTRLFGIKAITSFTGENNVDIINSANTYVQIRGLAWPA
LLVGWVAQSASLGMKDSWGPLKALAIATVINGTGDIVLCRFFSYGIAGAAWATTVSQVVA
AYMMIQALNDKGYKGCAISIPSPDELLQIFMIAGPVFLTMMSKVAFYSLLVYFATSMGTQ
TIAAHQVMVQLFMICAVWGEPLSQTAQSFMPELLYGVNRNLSKARMLLKSLVVVGTSFGL
ILASVAASVPWLFPKIFSPDPEVIREMHKIVLPYFLALCVTPSILSLEGTLLAGRDLKFI
SLSMSSIFVLASLLLMLLSSKGLGLSGCWFALVVFQWSRFFIALRRLTLSDGILYSEEST
QYELQKLKAV

Transcript Sequence

Gene sequence data has not been registered.